The invention provides an environment-friendly and high-efficiency compound feed for young turtle and a preparation method thereof. The feed comprises fish meal, alpha-starch, fermented bean meal, fish oil, yeast, methionine, lysine, milk powder, yolk powder, complex mineral premix for turtle feed, complex vitamin premix for turtle feed, calcium dihydrogen phosphate, enzyme preparation and Chinese herbal medicine additive; and the preparation method comprises the following steps: batching, primary cleaning, primary mixing, iron removing, crushing, secondary mixing and packaging. The formula of the feed is scientific and reasonable and improves the disease resistance of the young turtles; and the raw materials with high digestion and absorption rates are selected in the feed, which improves the feed transformation efficiency, reduces the discharge of the pollutants such as nitrogen, phosphor and the like, and reduces pollution to the feeding water body, thus reducing the disease occurrence of the young turtles and the drug usage, and finally reaching the requirements of the ecological feeding, improving the feed absorption and utilization rates, satisfying the nutrition needs of the young turtles, reducing the breeding cost and the pollution to the water body; furthermore, the preparation method is scientific and reasonable and has obvious economic benefit and environmental benefit.