The invention provides an electromagnetic thermal desorption device used for remediating contaminated sites. Contaminated soil is heated, stirred and conveyed in a ferromagnetic material stirring device and a tank body through electromagnetism. Through heating the contaminated soil in the device, the thermal desorption heat transfer property and the organic pollutant separating effect are improved. The electromagnetic thermal desorption device comprises a material conveying device, an electromagnetic heating device and an exhaust gas treating and purifying device, wherein the electromagnetic heating device comprises an excitation controller, a heating coil, a thermal insulating material, a heating and conveying device, a temperature probe, a circulating water cooler and the like; and the exhaust gas treating and purifying device comprises an exhaust gas collecting pipe, a dust precipitator, a condenser, a collector, a catalytic oxidation device and the like. For heavy metal, low-melting-point glass powder and natural mirabilite powder are added, glassy substances are formed after temperature is raised through heating, the glassy substances solidify, and heavy metal pollutants are eliminated. The electromagnetic thermal desorption device has the characteristics of high heating speed, high heat transfer effect and small exhaust gas output. The size of a system is small, a moving treatment platform can be integrated, and integral transporting in-situ operation is realized.