The invention discloses a molecular imprinting polymer filter paper for absorbing penicillin. The filter paper is prepared by following steps: (1) dissolving penicillin and monomer in acetonitrile, sealing, standing still for at least 6 hours, adding an initiator and a cross-linking agent, introducing nitrogen to remove the oxygen in the solution; (2) putting a filter paper into the solution prepared in the step (1), oscillating for at least 3 hours, taking the filter paper out, putting the filter paper in a dry container, sealing the container, putting the container in a constant temperature incubator with a temperature of 50 to 80 DEG C, and having polymerization reaction for 8 to 24 hours; (3) putting the filter paper prepared in the step (2) into a mixed solution of methanol and acetic acid, oscillating, washing away the penicillin, non-polymerized monomers and cross-linking agent on the filter paper, soaking the filter paper in methanol, washing away acetic acid, and drying so as to obtain the molecular imprinting polymer filter paper for absorbing penicillin. The monomer is a mixture of itaconic acid, acrylamide and 2-vinylpyridine with a mol ratio of 1:1 to 1.5:0.5 to 1, and the cross-linking agent is pentaerythritol tetramethacrylate. The molecular imprinting polymer filter paper for absorbing penicillin is a cheap and high-efficient antibiotic absorption material.