The invention discloses a method for classifying electric energy quality mixed disturbances based on multi-feature quantity of time-frequency domain. Voltage dip, voltage swell, short-term voltage interruption, impulsive transient, oscillatory transient, harmonic waves and flickering electric energy quality disturbances and mixed disturbances of a combination thereof are classified. The method for classifying the electric energy quality mixed disturbances concretely comprises the steps of: firstly, processing a disturbance signal by using an EEMD (Ensemble Empirical Mode Decomposition) and MIST (modified incomplete S-transform), and extracting nine time-frequency domain characteristic values; and then, inputting characteristic quantity to a blocked automatic classifying system to recognize the disturbances. By using the method, the mutual interference among single disturbances is fully considered and is effectively inhibited through the complementary time-frequency domain characteristic values. A simulation result shows that, under conditions of certain noises, the method can be used for effectively classifying the voltage dip, the voltage swell, the short-term voltage interruption, the impulsive transient, the oscillatory transient, the harmonic waves and the flickering electric energy quality disturbances and the mixed disturbances of the combination thereof.