The invention relates to a preparation method of a fluorine-containing polyacrylate soap-free emulsion. According to the invention, the fluorine-containing polyacrylate soap-free emulsion is prepared by adopting an amphiphilic segmented copolymer polyacrylic acid-b-polyhexafluorobutyl acrylate (PAA-b-PHFBA) to substitute a routine emulsifier, and carrying out soap-free emulsion copolymerization on acrylate monomers, and can be applied to the leather field, the textile field, the coating field, the papermaking field, the adhesive field and the like. The compatibility of the hydrophobic segment of the used PAA-b-PHFBA and above prepolymerization monomers is good, so a problem of bad compatibility of fluorine-containing monomers is solved, thereby the stability of the emulsion polymerization process is substantially improved. Additionally, the PAA-b-PHFBA is anchored to emulsion particles in the emulsion polymerization, and the hydrophilic segment stretches into a water phase to stabilize the emulsion particles through an electrostatic effect and a steric hindrance effect, so the storage stability and the freeze-thaw resistance stability of the emulsion are improved, disadvantages of bad adhesion, bad water resistance and bad solvent resistance of films of common emulsions are overcome, and the mechanical properties, the adhesion and the abrasive resistance of the film of the emulsion are improved.