The invention relates to a neutron logger for measuring stratigraphic porosity in borehole, and its technical solution mainly comprises top joint, casing, power supply framework, thermos flask, neutron detector (He 3 tube), signal processing circuit framework, screening body, neutron source house, and bottom joint, as well as pulse signal processing circuit, communication control and data transmission circuit, and power supply circuit, and it is characterized in that: the neutron detector is composed of two neutron detectors on the same side of the neutron source, where the two neutron detectors are respectively called short spacing (SS) and long spacing (LS), according to their spacing from the neutron source. And the SS and LS neutron detectors, screening body, fixing devices and pulse signal processing circuit are arranged in a heat insulating device and the two neutron detectors are both coated with thermal conductivity protective layers. The invention has high detecting efficiency, higher error compensation and data processing accuracy, high integrity of signal processing circuit and power supply circuit, and strong stability, convenient to use and maintain.