The invention discloses a heavy metal polluted soil repairing agent with a high content of biocarbon and humus, and an application method thereof. The repairing agent is composed one or more of kitchen garbage, blue algae, livestock and poultry manure, straw, wood chip, rice husk, plant wastes, dead animal due to diseases and residual body of livestock and poultry. The raw materials mentioned above is subjected to steps of impurity removing, grinding, and proportioning, and then the mixture is subjected to a sub-critical water treatment for 90 to 150 minutes at a temperature of 180 to 360 DEG C under a pressure of 1.8 to 5.8 MPa so as to obtain the tail product; wherein the biocarbon content accounts for not less than 45% of the dry substrate, the total nutrient content is 4 to 6%, the amino acid content is not less than 20%, the humus content is not less than 40%, the trace element content is not less than 0.5%, and the pH value of the repairing agent is 5 to 7. The provided repairing agent can be used to repair polluted soil, and can also be used to treat the soil secondary salinization and hardened soil caused by over application of chemical fertilizer and pesticides. The organic solid waste pollutants are processed to produce the repairing agent, thus the environment pollution problem is solved, and at the same time, the biocarbon and humus in the tail product can repair and improve the soil polluted by metals, chemical fertilizers, and pesticides.