The invention relates to a chitosan sustained release microsphere fertilizer loading 6-benzylaminopurine for tomatoes. The fertilizer is characterized by being prepared from the following raw materials: chitin, sodium hydroxide, 6-benzylaminopurine, ethylene glycol, acetic acid, sodium stearyl lactate, cyclohexane, triphosadenine, glutaraldehyde, absolute ethyl alcohol, petroleum ether, isopropanol, rice straws, soybean straws, mercaptoacetic acid, saccharomycetes, lime powder, brown coal powder, borax, monopotassium phosphate, monoammonium phosphate and a proper amount of water. The fertilizer prepared by the invention integrates production increase, high efficiency and long effect, improvement of the quality and improvement of soil, and has the advantages of being low in cost, simple in process, free of residues, pollution-free, labor-saving and time-saving during construction and the like.