The invention relates to a protective film for notoginseng seedlings, a preparation method and application thereof. The invention is a water-soluble gel made of water-soluble film-forming material, notoginseng polysaccharide, root growth promoter, preservative and pesticide, which can form a layer of protective film on the surface of notoginseng seedlings. The protective film of notoginseng seedlings obtained by using the preparation method of the present invention can reduce the water loss of notoginseng seedlings during the transplanting process, reduce the skin damage of the notoginseng seedlings caused by friction or seedling transplanting during the transportation process, resulting in Later, fungal infection or insect erosion caused by broken wounds can effectively reduce the chances of notoginseng suffering from root rot, sclerotinia, sheath blight, anthracnose and blight, and improve the survival rate of notoginseng seedlings. The notoginseng seedling protective film provided by the invention has good physical and chemical properties such as film-forming property, water resistance, air permeability and water permeability, and achieves the effect of protecting the healthy growth of crops.