The invention discloses a preparation method of special half-dried flour for physalis alkekengi rice noodles. According to the method, rice is used as a raw material. The method comprises the following steps of soaking the rice, performing whole-rice fermentation, performing washing and separation, performing draining, performing crushing, and finally performing solid state fermentation treatment so as to obtain the half-dried rice flour with low content of heavy metals. According to the method disclosed by the invention, the heavy metals in the rice are dissociated out by a fermentation method, the fermentation reaction efficiency is improved through a dynamic reverse-flow device, after water is thoroughly drained, the whole rice is crushed, rhizopus oryzae and ester-production fragrance-production yeast are added for performing solid state fermentation on the half-dried rice flour, and finally re-crushing is performed so that the half-dried rice flour is obtained for standby application. The rice flour prepared by the method has special fragrance and is low in the content of the heavy metals, wherein the content of cadmium is lower than 0.2mg/kg, the content of total mercury is lower than 0.02mg/kg, the content of lead is lower than 0.2mg/kg, the content of inorganic arsenic is lower than 0.2mg/kg, and the removing rate for the heavy metal cadmium can reach 95% or above; and besides, the method is simple to operate, low in cost and convenient to use, and can be used for production of the physalis alkekengi rice noodles.