The invention relates to a preparation method of a special biological selenium-rich nutrition solution for plants, wherein the components of the formula comprises (by weight): 0.3-1.3% of cystine, 0.5-1.5% of a methionine-copper complex, 0.7-1.7% of Clostridium butyricum, 1-2% of a common yam rhizome extract, 1.2-2.1% of an amino acid-iron complex, 1.3-2.2% of a Sterculia lychnophora Hance extraction liquid, 1.9-2.9% of folic acid, 2.5-3.5% of Saccharomyces cerevisiae, 2.9-3.9% of a Fritillaria ussuriensis Maxim extract, 2.3-3.3% of acetohydroxamic acid, 2.7-3.7% of sorbitol, 2.8-3.8% of a fructus momordicae extract, 1.1-2.1% of Bifidobacterium bifidum, 0.5-1.5% of Trisodium hydrogen diphosphate, 0.1-1% of Glycerol, 0.8-1.8% of a Cassia nomame extract, 0.2-1% of Avocado oil, 0.9-1.9% of Macrocystis pyrifera powder, 2.7-3.7% of probiotics, 1.7-2.7% of yeast selenium, and 71.9-52.4% of water. According to the present invention, the special biological selenium-rich nutrition solution canwell supplement nutrition elements required in plant growth, strengthening and enlarge seedlings, promote the robust growth of plants, enhance the stress resistance, the cold resistance and the disease resistance of plants, achieve the strong stems and the green leaves of plants, fundamentally reduce the occurrence of diseases, balance the plant nutrition, ensure the healthy growth of plants, andprolong the flowering period of plants.