The invention discloses a method for rapidly producing a high-quality organic fertilizer by virtue of high-temperature aerobic secondary fermentation and relates to the technical field of microorganism application. The method comprises the following steps: A, raw material preprocessing; B, zymocyte preparation, namely a, preparation of high temperature zymocyte: 1, preparation of stock culture of the high-temperature zymocyte, 2, preparation of sterilizing materials of the high-temperature zymocyte, 3, inoculation of the stock culture of the high-temperature zymocyte, 4, fermentation of the stock culture of the high-temperature zymocyte, and 5, secondary fermentation, and b, preparation of middle-temperature and low-temperature zymocyte; C, inoculation of the high-temperature zymocyte; D, temperature rising and fermentation; E, sterilization; F, fermentation at a high temperature; G, inoculation of the middle-temperature and low-temperature zymocyte; H, cooling and secondary fermentation. The method has the characteristics of having short fermentation cycle, less investment and low cost, and being capable of rapidly preparing organic wastes into the high-quality organic fertilizer, and is applicable to rapidly processing various organic wastes; the prepared high-quality organic fertilizer can be used as a base fertilizer for planting of crops such as rice, fruits, vegetables and melons and fruits.