The invention provides an intelligent control method of a loading machine. An intelligent control system is provided, and the system comprises a whole machine controller and further comprises a storage device, a first displacement sensor, a first pressure sensor, a first electric control flow valve, a first electric control reversing valve, a second displacement sensor, a second pressure sensor, a second electric control flow valve, a second electric control reversing valve, a first electric control pressure reduction valve, a second electric control pressure reduction valve, an electric control variable pump, an electric control overflow valve capable of adjusting highest oil pressure of a work system, an electric control transmission, a first electric control clutch connected with the loading machine electric control variable pump and the electric control transmission, a second electric control clutch connected with a loading machine drive shaft and the electric control transmission and a power system controller, all of which are connected with the whole machine controller. Through control over the intelligent system, loading automation of a shovel bucket is achieved. According to the technical scheme, a driver can be replaced for automatic and intelligent material shoveling and containing, the labor strength of the driver is relieved, the machine work state is improved, and the more efficient and healthier development of the loading machine industry is promoted.