The invention discloses a preparation method of grape special purpose seaweed fertilizer. The preparation method utilizes sodium alginate production enterprise by-product kelp slag as a raw material, builds a raw material pretreatment method and develops a bio-refining technology for two-step catalytic conversion of kelp slag based on an enzyme. Through the establishment of substrate and enzyme feeding strategy, substrate inhibition is reduced, high concentration substrate system enzyme efficient catalytic conversion is realized, high concentration seaweed fertilizer is prepared, recycling use of kelp processing wastes and protection of the environment are realized, a kelp industry chain is extended and the kelp processing technology and seaweed fertilizer production level are improved. The preparation method innovates a seaweed fertilizer preparation mode, utilizes kelp production enterprise by-products as raw materials, realizes waste recycling, improves seaweed resource utilization efficiency, protects the environment, reduces a seaweed fertilizer production cost, improves a yield of grapes after application, has strong practicability and can be easily industrialized. The seaweed fertilizer is a pure natural product, does not product pollution, can be degraded, satisfies industrial demands and is environmentally friendly.