The invention discloses a loading type Pd base metal nanometer cluster catalyst, a preparing method and applications thereof. The catalyst comprises Pd metal nanometer particles of 1-25nm, or bimetal or polymetal nanometer particles containing Pd, and ferric oxide nanometer particles, wherein the ferric oxide nanometer particle is used as the carrier, has the primary particle size of 5-200nm, and has the general formula of FeyOx; the bimetal or polymetal nanometer particles are selected from one or a plurality of Pt, Rh, Ru, Os, Ir and Re; when the metal nanometer particles are Pd nanometer particles, x/y is greater than 1, but is smaller than 4/3, or is greater than 4/3, but is smaller than 3/2; and when the metal nanometer particles are bimetal or polymetal nanometer particles containing Pd, x/y is greater than 1, but is smaller than or equal to 3/2. The catalyst has excellent activity, selectivity and stability on the selective hydrogenating synthesis chlorinated arylamine of the chlorinated aromatic compounds, solves the problems of hydrogenolysis and dechlorination of products in the process of the Pd catalyst catalyzing the chlorinated aromatic compounds to hydrogenate to prepare the chlorinated arylamine, and has important industrial application values.