The invention discloses an urban rainfall flood preventing and treating intelligent control system and a control method. A road surface accumulated water level sensor, a river level sensor, a well and pond level sensor, a pipeline, a flow rate sensor and a flow sensor of a pump outlet and a speed adjusting frequency converter arranged on a pump are arranged. A central control unit is arranged and in signal and control connection with the road surface accumulating water level sensor, the river level sensor, the well and pond level sensor, the flow rate sensor, the flow sensor and the speed adjusting frequency converter. The central control unit is provided with a display with a big screen, a printer, an interface and a communication line, wherein the interface and the communication line transmit data with an upper controller. The control method includes the following steps that the control system is set and an initial value of the control system is set; a network line is opened, the central control unit is connected and the system operates; warning situations are dealt with in time; data is filed, settled and reported. The urban rainfall flood preventing and treating intelligent control system and the control method are suitable for monitoring, preventing and treating of urban drainage and rainfall floods, complete in structure, high in automaticity, easy to operate, timely and accurate in monitoring and capable of ensuring safety of urban drainage and flood control.