The invention discloses a hybrid optimization method of three-level hybrid three-level optimization loach fingerlings. Related materials in steps comprise: A, tropic stock loach of two-year-old pond smelt of 50 Jin; B, cold zone stock loach of two-year-old female fish of 100 Jin; C, (1) sulfuretted hydrogen, (2) nitrite, (3) ammonia nitrogen, and (4) blue-green algae, and D, (1) fish chorionic gonadotrophin, and (2) domperidone injection liquid. The hybrid optimization method is a method of survival of the fittest and includes four steps. The hybrid optimization method of the three-level hybrid three-level optimization loach fingerlings can culture good stocks. Moreover, the stocks has strong vitality, disease-resistant capacity and anti-pollution capacity, diseases are few, medicine feeding is not needed during culture production, growth is fast, culture is easy, acre yield is high, male bodies and female bodies are uniform in size and good in quality, and the hybrid optimization method is suitable for an ecotype pollution-free high density culture model, can save culture sites, and is suitable for culturing the good stocks of export for earning foreign exchange.