The invention provides a konjac glucomannan and sodium alginate composite drug-loaded microsphere and a preparation method and application thereof.The preparation method of the composite drug-loaded microsphere comprises the following steps that a konjac glucomannan solution and a sodium alginate solution are mixed, attapulgite is added and stirred, fluorouracil is added and stirred, and the konjac glucomannan and sodium alginate composite drug-loaded microsphere is obtained. And injecting the solution into a CaCl2 solution by using an injector to form microspheres, transferring the microspheres into a glutaraldehyde solution, reacting, washing and drying. The inorganic mineral attapulgite is added into a natural high polymer material to increase the encapsulation and controlled release of the natural high polymer material to drugs, the composite material is prepared by a simple gel method, the encapsulation efficiency of fluorouracil is high, and the burst release phenomenon of 5-FU in a simulated solution can be obviously reduced; the preparation method disclosed by the invention is simple, the raw materials are rich, the thermal stability is good, the biocompatibility is good, the drug encapsulation efficiency is high, and the prepared composite drug-loaded microspheres are obvious in slow-release effect.