The present invention provides a strain of Bacillus subtilis CGMCC NO.7641, wherein with the strain, oligosaccharides, antigen proteins, TI and other anti-nutritional factors can be completely degraded within 24 h, and the acid-soluble protein content can be significantly increased, such that the fermented soybean meal quality is improved significantly. According to the present invention, the method of the present invention is used to pre-treat the soybean meal before the fermentation, such that the crude protein content and the acid-soluble protein content of the obtained fermented soybean meal are significantly increased, and the trypsin inhibitor is significantly reduced; and with application of the fermented soybean meal of the present invention in preparation of feed concentrate, pet feed, aquatic feed, livestock and poultry feed and other animal feed, the macromolecular protein is subjected to low molecular weight degradation and the acid-soluble protein content is significantly increased, such that animal absorption and utilization is easily achieved, the animal growth is promoted, the digestion utilization rate and the conversion rate are increased, the feed cost is reduced, and the industrial implementation is easily achieved.