The invention relates to a multifunctional graphene/high-molecular composite material water permeable membrane, a preparation method, and an application thereof. A high-molecular moisture-conductive polymer and a graphene-based composite material are organically bonded in a manner of forming effective chemical bonds, such as a hydrogen bond, an ionic bond, a covalent bond and the like, through polar functional groups, thereby forming a water permeation channel with reinforced hydrophilic-hydrophobic groups on the basis of the moisture-conductive polymer, and meanwhile, significantly improving the mechanical strength, anti-friction strength and acid- and alkali-resistant property, anti-bacterial and anti-fouling capabilities, heat conductivity and heat resistance and the like characters. The multifunctional composite water permeable membrane has long service life, is free of replacement during operation and has self-cleaning capability, and can be applied in the field of whole-heat exchanger, humidity conditioner, sewage treatment and other fields requiring water permeation or water filtration.