The invention discloses a composite probiotics powder and a preparation method thereof. The composite probiotics powder is characterized by comprising the following components: fructose-oligosaccharide, milk powder, polydextrose, citrus aurantium dulcis fruit, isomaltooligosaccharide, fructus crataegi, wolfberry, poria cocos, semen cassia, semen pruni, semen cannabis, lotus leaf, semen coicis, citric acid, vitamin E and lyophilized lactobacillus powder. The lyophilized lactobacillus powder comprises the following components: lactobacillus plantarum, lactobacillus rhamnosus, lactobacillus reuteri, lactobacillus acidophilus, lactobacillus casei, bifidobacterium longum, bifidobacterium lactis and bifidobacterium adolescentis. In the invention, the composite probiotics powder made by mixing avariety of lactobacillus lyophilized powder and adding a variety of prebiotics and medicinal and edible ingredients has rich nutrients and a variety of health care functions, especially significant effect on adjusting human gastrointestinal function and improving constipation effect, and high safety, no side effect, high production efficiency, and broad market prospects.