The present invention discloses a three-stage biological comprehensive treatment method for printed circuit board (PCB) waste water. The method comprises a three-stage biological treatment process, and is characterized in that: the method is performed by the following steps that: (1) PCB mixing waste water is poured into a reaction tank 1, the pH value is adjusted to 2.7-3.2 with sulfuric acid, ferrous sulfate is added, the waste water is transferred to a flocculation tank 1, the pH value is adjusted to more than 7 by an alkali solution, a flocculating agent is added to carry out precipitation, and the waste water and the resulting precipitation are transferred into a precipitation tank; (2) the waste water is poured into a neutralization tank, a nitrogen source is added, the pH value is adjusted to 6.8-7.2, the resulting waste water enters an aeration tank to carry out biodegradation, and flows through a precipitation tank 2; (3) the waste water is poured into a reaction tank 2, the pH value is adjusted to 8.8-9.2, the flocculating agent is added, the waste water is introduced to a precipitation tank 3, and then is discharged. With the present invention, the grinding plate waste water, the printing ink waste water, the copper-containing waste water and the electroplating waste water can be simultaneously treated, the treatment efficiency of the organic compound with high complex copper is high, and the cost is low.