The present invention provides a method for comprehensively treating high salt content organic industrial wastewater, and relates to the field of the organic material preparing technique. The method of the invention mainly comprises the following steps: executing acid-alkali adjustment to the organic wastewater until pH=7-9, preheating to 30-60 DEG C; introducing the wastewater into a triple effect evaporator for executing triple effect evaporation, executing salting out to the evaporated wastewater which is condensed to a certain degree so that the solid and liquid are separated; separating the concentrated liquid for continuing the condensation; when the separated liquid satisfies a certain requirement, atomizing into an incinerator for incinerating and discharging according to the standard, and introducing the triple effect evaporation condensation water into a biochemical treating system. The method of the invention can totally dispose and remove the organic matter in the high salt content organic industrial wastewater so that the high salt content organic industrial wastewater can be charged according to the standard. The method of the invention has the advantages of unique method, simple technical process, easy operation, low operation cost, large treating capacity, low regeneration energy consumption, no easy forming of secondary pollution after abandon, better economic and social benefit, and wide application range. The method of the invention can be widely applied for the treating of the high salt content organic wastewaters of garbage penetrating fluid, dye intermediate wastewater, etc.