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67 results about "Microbial ecology" patented technology

Microbial ecology (or environmental microbiology) is the ecology of microorganisms: their relationship with one another and with their environment. It concerns the three major domains of life—Eukaryota, Archaea, and Bacteria—as well as viruses.

Compound probiotics preparation for biological organic fertilizers and preparation method thereof

The invention discloses a compound probiotics preparation for biological organic fertilizers and a preparation method thereof. The preparation method comprises the following steps: performing activated culture of 14 kinds of probiotics, including Pseudomona putida, Streptomyces violovariabilis, Rhizobium sp., Azotobacter chroococcum, Bacillus subtilis, Bacillus amyloliquefaciens, Bacillus cereus, Bacillus subtilis, Bacillus weihenstephanensis, Bacillus mucilaginosus, Bacillus thuringiensis, Saccharomyces rouxii, Streptomyces griseus var. ferrugineus, and Streptomyces microflavus; performing mixed inoculation at a proportion of 1% to 5% to a 500 mL liquid seed culture medium; then performing amplification culture; and finally delivering the strains to a 500 mL fermentor and fermenting for 3 to 5 days under such conditions that the temperature ranges from 28 DEG C to 30 DEG C and the rotational speed is 200 rpm, to obtain a liquid-state compound probiotics preparation. The compound probiotics preparation for biological organic fertilizers, provided by the invention, plays important roles of taking advantage of microbial ecology, improving soil, promoting plant growth, improving the yield and disease resistance of crops and reducing the consumption of fertilizers.
Owner:周剑平 +1

Microbial agent for repairing petroleum-polluted saline alkali soil and preparation method thereof

The invention relates to a microbial agent for repairing petroleum-polluted saline alkali soil and a preparation method thereof, and belongs to the technical field of resource environment. According to a principle of microbial ecology, microbial community is extracted and screened from soils with high salt and alkali and high petroleum pollution to prepare the microbial agent, wherein obligate petroleum degrading bacteria can be sphingolipid bacteria, comamonas, chitin autophagy bacteria and bacillus. According to culture medium and soil environment experiments, the microbial agent can guarantee that the extracted microorganism can be survived in the soils with the salt content of 5,000mg / kg, and meanwhile, the degradation capability to the polluted soils with the petroleum content of 10-50g / kg can reach 80%. The microbial agent has the advantages of simple process, rich microorganisms, obvious dominant bacteria, good stability and capability of facilitating obligate petroleum degrading bacteria to adapt to a new pollution environment, increasing and improving the micro-ecological environment quality of the soils and avoiding secondary pollution to the environment, and can obviously improve the degradation efficiency of petroleum hydrocarbon in the saline alkali soil.
Owner:TIANJIN UNIVERSITY OF TECHNOLOGY

Method for studying structural diversity of daqu bacterial community

InactiveCN102382877AAvoid the downside of losingReveal and recognize diversityMicrobiological testing/measurementCommunity structureMicrobial ecology
The invention relates to a method for studying the structural diversity of a daqu bacterial community, i.e. the denaturing gradient gel electrophoresis (DGGE) technology, which belongs to the technical field of microbial ecology and mainly comprises the following steps that: 1), daqu genomic deoxyribonucleic acid (DNA) is directly extracted; 2), bacterial universal primers are selected, and specific DNA fragments in the bacterial ribosome DNA are amplified; 3), polymerase chain reaction (PCR) products are separated through DGGE; 4), corresponding strips of microbes in the DGGE fingerprint map are recovered in a gel cutting way; 5), PCR is carried out again, products are connected to a T carrier, the blue and white spot screening is carried out, and positive clone verification is carried out; and 6), the species information of the corresponding microbes of the DGGE strips is obtained through the sequence test. The method does not rely on the molecular biology technology of the traditional culture method, has the characteristics of sensitivity, convenience and accuracy and solves the difficult problems to study some microbes incapable of being cultured or difficult to culture, and the method provides the technical basis for the verification of the daqu bacterial community structure and the discovery of new wine brewing microbes or functional microbes.
Owner:CHINA NAT RES INST OF FOOD & FERMENTATION IND CO LTD

Method for remedying salmonella-polluted soil by utilizing antagonistic microbe agent

The invention discloses a method for remedying salmonella-polluted soil by utilizing antagonistic microbe agent, comprising the following steps: separating the salmonella-polluted soil by utilizing an aseptic filter paper plate method to obtain antagonistic bacterium suitable for the soil environment and having the function of inhibiting or killing the salmonella; fermenting antagonistic microbe strains through the following processes: inoculum inoculation, first-stage culture, second-stage culture and inoculation and second-stage extensive culture to obtain antagonistic bacteria liquid; spraying the antagonistic bacteria liquid to the salmonella-polluted soil, and then uniformly raking the soil. In the method, the microbial ecology principle is applied, and the function of inhibiting or killing the antagonistic bacterium of the salmonella which is obtained from the soil separated and screened from the soil is utilized to remedy the in-situ microbes for the salmonella-polluted soil, not only the damage of the physical remediation to the soil structure and the soil organism is avoided, but also the secondary pollution caused by the chemical remediation is avoided, therefore, the method is a low-cost and environmentally friendly remediation way.
Owner:INST OF SOIL SCI CHINESE ACAD OF SCI

Method for analyzing Bacillus community structure in white spirit fermentation system

The invention discloses a method for analyzing the Bacillus community structure in a white spirit fermentation system, belonging to the technical field of microbial ecology. According to the invention, the diversity of a Bacillus community structure in the white spirit fermentation system is semi-quantitatively analyzed by a nested PCR-DGGE (polymerase chain reaction-denaturing gel gradient electrophoresis) method. The method comprises the following steps of: extracting the total genome DNA (deoxyribonucleic acid) in a yeast or fermented grains sample by a bead milling method; performing two steps of amplification of the Bacillus specific segment through the nested PCR; performing DGGE electrophoretic analysis; determining the microorganism species corresponding to the DNA stripe by use of a standard strain; performing glue cutting of the unknown stripe and recycling and then performing PCR again; connecting the T vector and cloning; performing DGGE electrophoresis again; performing positive cloning sequencing and performing blast comparison in the GenBank databae to obtain the microorganism information; digitally processing DGGE map by use of quantityone software; and calculating the proportion of different Bacillus strains in the total Bacillus flora according to the brightness of the stripe. The method disclosed by the invention has the advantages of simplicity, strong specificity and good repeatability, and lays foundation for further studying the importance of Bacillus in white spirit production.
Owner:JIANGNAN UNIV

Aquaculture water in-situ purification composite microbial membrane and using method thereof

The invention provides an aquaculture water in-situ purification composite microbial membrane and a using method thereof, and belongs to the technical field of aquaculture and environmental protection. A functional element of the composite microbial membrane is a membrane component in which paenibacillus polymyxa, lactobacillus plantarum, rhodobacter sphaeroides, rhodococcus pyridinovorans, bacillus amyloliquefaciens and other beneficial microorganisms are immobilized. A preparation process of the aquaculture water in-situ purification composite microbial membrane comprises selecting of a soft packing microorganism carrier, composite bacteria liquid preparation, microorganism immobilization and other steps; the composite microbial membrane is mounted in aquaculture water, beneficial microbes begin activation reproduction, long-term regulation of microbial ecology of the aquaculture water can be realized, ammonia nitrogen, nitrite and hydrogen sulfide and other toxic and harmful substances in pond can be controlled, metabolites can be licked by farmed fish, shrimp, and other aquatic organisms, so that the immunity is improved, the growth speed of the farmed species is increased, and the aquaculture water in-situ purification composite microbial membrane is especially adapt to ponds for high density aquaculture of shrimp, crab, fish and the like.
Owner:无锡中科活力生物技术有限公司 +1

Method for quantitating anaerobic ammonia oxidizing bacteria in sediment of aquiculture environment

InactiveCN102925581ACreate Quantitative ResearchOvercome the disadvantages of difficult isolation and cultureMicrobiological testing/measurementFluorescence/phosphorescenceBacteroidesCoverage ratio
The invention relates to a method for quantitating ammonia oxidizing bacteria in a sediment of an aquiculture environment by a real-time fluorescent quantitative PCR (polymerase chain reaction) technology, which belongs to the field of environmental microbial ecology. The method comprises the steps that DNA (deoxyribonucleic acid) of a sample sediment is extracted and quantitated; an HZO (hydrazine oxidordeuctase) gene specific primer is subjected to PCR amplification; standard plasmids are constructed; and a fluorescent quantitation PCR amplification curve and a standard curve are made. The quantity of the anaerobic ammonia oxidizing bacteria in a sample is calculated by comparing a detected sample Ct value with the standard curve; an obtained log value of the initial template gene copy number has a better linear relationship with the Ct value; and a regression coefficient is greater than 0.99. According to the method, an HZO gene is used for conducting quantitative analysis on the ammonia oxidizing bacteria under an anaerobic condition; the deficiencies that the specificity is not high, the coverage ratio is low and the method is inaccurate due to the fact that the a 16S rRNA (ribosomal ribonucleic acid) gene is used for quantitating in the existing method are overcome; and the method for quantitating the ammonia oxidizing bacteria in the sediment of the aquiculture environment is high in specificity, quick and accurate.
Owner:CHINA UNIV OF PETROLEUM (EAST CHINA)

Method and device for determining micro-ecological imbalance of human intestinal tract and electronic equipment

The invention provides a method and device for determining micro-ecological imbalance of the human intestinal tract and electronic equipment, and relates to the technical field of microbial ecology. The method for determining the micro-ecological imbalance of the human intestinal tract comprises the steps that intestinal flora data of the target human body is obtained, wherein the intestinal floradata is sample data containing markers of multiple species; the intestinal flora data is input into an intestinal random forest prediction model for prediction, and an output result is obtained; theintestinal random forest prediction model is correspondingly provided with a threshold used for judging the phenotypes of samples, the intestinal random forest prediction model comprises a random forest OTU model or a Shannon exponential random forest model; based on the output result, whether or not the micro-ecology of the intestinal tract of the target human body is in an unbalanced state is judged. The method and device for determining the micro-ecological imbalance of the human intestinal tract and the electronic equipment can judge whether or not the target human body is in an intestinalmicro-ecological imbalance state through the prediction model.
Owner:JIANGXI PRECISION GENE CO LTD

Quantification method for denitrifying microorganisms in aquaculture environment sediments

The invention discloses a method for real-time fluorescence quantification PCR (qPCR) detection of denitrifying microorganisms in aquaculture environment sediments, and belongs to the technical field of environmental microbial ecology. The method comprises the following contents: metagenome DNA extraction and concentration determination of sediment samples in various stations, PCR amplification of nirK and nirS genes, construction of a standard plasmid, preparation of a standard curve, qPCR amplification and calculation of the number of denitrifying microorganisms in the samples according to a qPCR result in accordance with the standard curve. The method disclosed by the invention can be used for determining the number of the denitrifying microorganisms in an aquaculture environment through quantitative analysis on two genes, namely nirK and nirS, so as to overcome the shortcoming that 16S rRNA gene cannot be used in the quantification of the denitrifying microorganisms as well as the shortcoming that the prior art, which focuses on some functional gene only, is incomplete in quantification; and the provided method for detecting the number of the denitrifying microorganisms in the aquaculture environment is good in specificity, high in repeatability and high in accuracy. According to the method disclosed by the invention, logarithm values of nirK and nirS gene copy numbers keep a good linear relation with Ct value of a luminescence threshold, and the regression coefficient of the standard curve is above 0.99.
Owner:CHINA UNIV OF PETROLEUM (EAST CHINA)

Compound probiotics preparation for biological organic fertilizers and preparation method thereof

The invention discloses a compound probiotics preparation for biological organic fertilizers and a preparation method thereof. The preparation method comprises the following steps: performing activated culture of 14 kinds of probiotics, including Pseudomona putida, Streptomyces violovariabilis, Rhizobium sp., Azotobacter chroococcum, Bacillus subtilis, Bacillus amyloliquefaciens, Bacillus cereus,Bacillus subtilis, Bacillus weihenstephanensis, Bacillus mucilaginosus, Bacillus thuringiensis, Saccharomyces rouxii, Streptomyces griseus var. ferrugineus, and Streptomyces microflavus; performing mixed inoculation at a proportion of 1% to 5% to a 500 mL liquid seed culture medium; then performing amplification culture; and finally delivering the strains to a 500 mL fermentor and fermenting for 3 to 5 days under such conditions that the temperature ranges from 28 DEG C to 30 DEG C and the rotational speed is 200 rpm, to obtain a liquid-state compound probiotics preparation. The compound probiotics preparation for biological organic fertilizers, provided by the invention, plays important roles of taking advantage of microbial ecology, improving soil, promoting plant growth, improving the yield and disease resistance of crops and reducing the consumption of fertilizers.
Owner:周剑平 +1

Magnetization slow-release fertilizer capable of improving soil microbial ecology and preparation method thereof

The invention discloses a magnetization slow-release fertilizer capable of improving soil microbial ecology and a preparation method thereof. The magnetization slow-release fertilizer capable of improving the soil microbial ecology is made from raw materials with parts by weight: egg shells 50-70, fulvic acid potassium 26-29, ammonium bicarbonate 23-26, furfural residues 260-270, grass carbon 190-210, sodium hydrogen sulfite 8-14, fly ash 100-110, pyrite ash 80-90, cassava starch 26-30, calcium acetate 4-8, composite bacterial strains 13-17 and moderate water. The magnetization slow-release fertilizer capable of improving the soil microbial ecology adds various magnetotactic microorganisms, various different kinds of beneficial magnetotactic microorganisms also exist in soils simultaneously, the magnetization slow-release fertilizer capable of improving the soil microbial ecology can affect activity of the beneficial magnetotactic microorganisms through magnetization of fertilizers by adopting organic humus in the fertilizers as a nutrient source, improves activity of proteins and enzymes, and enhances activity of microorganisms, thereby promoting organic matters in the soils to resolve, and improving the content of absorbable nutrients of crops.
Owner:ANHUI HUACHUANG MODERN AGRI TECH

Reagent kit and testing method for rapidly evaluating whether intestinal microecology of human body is unbalanced

The invention relates to the field of microbial ecology, and aims at providing a reagent kit and a testing method for rapidly evaluating whether intestinal microecology of a human body is unbalanced. The reagent kit detects a level ratio of bifidobactirium to enteric bacilli in feces by a relative fluorescence quantitative PCR (polymerase chain reaction) technique, and then evaluates the unbalance degree of the intestinal microecology. The method comprises the steps that a bifidobactirium and enteric bacilli quantitative detection primer with best specificity and high amplification efficiency is selected; the DNA yield (deoxyribose nucleic acid) of bifidobactirium and enteric bacilli is calculated; microorganisms are subjected to total DNA extraction; relative quantitative detection of bifidobactirium DNA and enteric bacilli DNA in total DNA is conducted; an X value is calculated through a formula; and the unbalance degree of the intestinal microecology is evaluated according to the X value. The reagent kit optimizes bifidobactirium and enteric bacilli quantitative detection conditions, has the advantages of high speed, good accuracy and high sensitivity, can be used for clinically evaluating a therapeutic effect of a microecological modifier, and can also be used for guiding administration of drugs for clinical digestive system dysfunction.
Owner:ZHEJIANG UNIV

Method for simultaneously identifying short-cut denitrifying bacteria and triclosan degrading bacteria based on DNA stable isotope nucleic acid probe technology

The invention discloses a method for simultaneously identifying short-cut denitrifying bacteria and triclosan degrading bacteria based on a DNA stable isotope nucleic acid probe technology, and belongs to the technical field of sewage biological treatment technologies and microbial ecology. The method comprises the steps of (1) starting a short-cut denitrification system based on granular sludge and biologically removing triclosan in the system; (2) carrying out 13C-propionic acid sodium and 13C-triclosan isotope microcosm experiments; (3) separating heavy-layer DNA by adopting an ultra-high-speed centrifugation method based on a cesium chloride density gradient solution; and (4) carrying out DNA marking degree evaluation and flora structure analysis. According to the method for simultaneously identifying active short-cut denitrifying bacteria and triclosan degrading bacteria in the short-cut denitrification granular sludge system based on the DNA stable isotope nucleic acid probe technology, a microorganism capable of simultaneously realizing short-cut denitrification and triclosan removal can be explored and disclosed, and a theoretical support is provided for an actual process of removing triclosan by short-cut denitrification in a sewage treatment plant.
Owner:BEIJING UNIV OF TECH

Method for extracting metagenome DNA of compost and application thereof in identifying denitrifying bacteria

The invention discloses a method for extracting metagenome DNA of compost and application thereof in identifying denitrifying bacteria. The method comprises the following steps: (1), a compost sample is subjected to physical splitting decomposition in DNA extraction solution; (2), lysozyme is added into the mixture; (3), protease K is added into the mixture; (4), SDS water solution is added into the mixture; (5), liquid supernatant is collected by centrifugation; (6), DNA extraction liquid and SDS water solution are added into sediment obtained in the step (5), then liquid supernatant is collected by centrifugation; (7), the liquid supernatant obtained in the step (5) and the liquid supernatant obtained in the step (7) are mixed; (8), phenol-chloroform-isoamyl alcohol is extracted; and (9) the liquid supernatant obtained in the step (8) and isopropyl alcohol are blended, then sediment, which is metagenome DNA of compost, is collected. The method for extracting metagenome DNA of compost and the application thereof in identifying denitrifying bacteria are of great application value for the research on the varieties of bacteria (especially the variety of denitrifying bacteria) in the compost samples produced by different fermentation times. And effective technical support is provided for the research and the application of the compost as well as the research on molecular microbial ecology.
Owner:CHINA AGRI UNIV
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