The invention discloses toadstool wheat germ chewy cookies and a preparation method thereof. The toadstool wheat germ chewy cookies are prepared by the following raw materials in parts by weight: 200-300 parts of flour, 30-50 parts of sweet potato powder, 50-70 parts of white sugar, 15-17 parts of wheat germ, 15-20 parts of toadstool powder, 8-12 parts of eggs, 30-40 parts of refined vegetable oil, 0.8-1.2 parts of lecithin, 0.8-1.2 parts of edible salt, 1.5-2.0 parts of ammonium bicarbonate, 0.5-0.7 part of monocalcium phosphate, 1.5-1.7 parts of sodium pyrosulfite, 0.3-0.5 part of protease preparation, 0.05-0.08 part of flavouring agent, and a proper amount of water. The preparation method comprises the following steps: (1), carrying out pretreatment on wheat germs; (2), preparing the toadstool powder; (3), blending; (4), forming; (5), baking; (7), packaging. The chewy cookies prepared by the invention are nutritious, have the efficacies of benefiting intestines and stomach, boosting brain and refreshing, preventing against the cold, and enhancing human body immunity, can be eaten always, have the effects of resisting viruses and tumour, and can reduce and eliminate risks of cancer.