The invention belongs to the field of super-amphiphobic materials, and discloses amphiphilic crosslinkable fluorosilicon resin, a water-borne coating and a super-amphiphobic coating prepared through the water-based paint. The amphiphilic crosslinkable fluorosilicon resin is prepared by the means that hydrogen containing organic silicon A, the epoxy containing substance B, the fluorine containing substance C, modified silicon dioxide D and the hydrotropic substance E are mixed into a solvent, the mixture is added into a reaction kettle, inert gas is bubbled into the reaction kettle, the temperature is increased to 60-140 DEG C under the stirring condition, then the catalyst F is added, stirring is performed for 5-24 hours, and the reactant is precipitated into normal hexane or methyl alcohol; the amphiphilic crosslinkable fluorosilicon resin coating is dissolved in a aqueous-organic solvent, water is dropwise added into the maxture, so that the amphiphilic crosslinkable fluorosilicon resin coating is obtained; curing agent is added into the amphiphilic crosslinkable fluorosilicon resin water-borne coating, the mixture is stirred uniformly, then a base material is soaked into the amphiphilic crosslinkable fluorosilicon resin coating, or the amphiphilic crosslinkable fluorosilicon resin coating is sprayed on the surface of the base material, and drying operation is performed, so that the super-amphiphobic coating is obtained.