The invention relates to a preparation method of organic/inorganic hybrid nano fiber drug carrying microspheres. The preparation method comprises the following steps of (1) preparing drug carrying nano particles, preparing a high-molecular polymer solution; (2) adding the drug carrying nano particles into the polymer solution, dispersing with ultrasonic wave, stirring, to prepare a homogeneous mixed solution; (3) adding hydrogen peroxide into the mixed solution, oscillating with ultrasonic wave under an ice bath condition, to obtain a water-in-oil primary emulsion; and (4) preparing an external water phase solution, adding the external water phase solution into the water-in-oil primary emulsion drop by drop, oscillating with ultrasonic wave or homogenizing mechanically, to form an oil-in-water-in-oil secondary emulsion, stirring until the residual organic solvent is volatilized completely, collecting microspheres, and drying by freezing, so as to obtain products. The hybrid nano fiber drug carrying microspheres prepared by the preparation method have low density, large specific surface area, high surface infiltration capacity, are safe and nontoxic, are degradable, have excellent biocompatibility and can be controlled to release for a long time, and therefore, the application prospect is wide.