The invention discloses lotus seed extra-thin noodles with health care efficacy and a manufacturing method thereof. The manufacturing method comprises the following steps: using whole lotus seed meal through ultrahigh pressure treatment, water, flour, salt, tapioca flour and edible oil as raw materials, kneading dough, mixing the edible oil with the dough, mixing the flour with the dough, cutting the dough into small dough, stretching the dough to form noodles, performing solar energy-heat pump combined drying, and packaging the noodles to obtain the lotus seed extra-thin noodles with the health care efficacy. With application of the manufacturing method disclosed by the invention, as the lotus seed whole flour through ultrahigh pressure treatment is added to the flour, the manufactured extra-thin noodles are unique in flavor, and further have the effects of tranquilizing mind by nourishing the heart, tonifying the kidney and nourishing spleens; meanwhile, the lotus seeds are subjected to the ultrahigh pressure treatment, and the content of resistant starch therein can be greatly increased, so as to achieve certain effects of regulating intestinal microecological balance and improving the gastrointestinal function; on the other hand, the solar energy-heat pump combined drying technology is used to greatly shorten sun-curing time and avoid the phenomena that in the conventional extra-thin noodles sun-curing process, the extra-thin noodles are yellow and degraded in quality due to environment pollution and weather effect, so that the lotus seed extra-thin noodles are more sanitary and safer.